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locarna v2.0  (Informatik Inc)

 
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    Structured Review

    Informatik Inc locarna v2.0
    ITS2 sequence structure-based alignment generated by <t>LocaRNA-P.</t> Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.
    Locarna V2.0, supplied by Informatik Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/locarna+v2%2E0/pmc10532482-124-6-9?v=Informatik+Inc
    Average 90 stars, based on 1 article reviews
    locarna v2.0 - by Bioz Stars, 2026-07
    90/100 stars

    Images

    1) Product Images from "Compensatory Base Changes in ITS2 Secondary Structure Alignment, Modelling, and Molecular Phylogeny: An Integrated Approach to Improve Species Delimitation in Tulasnella (Basidiomycota)"

    Article Title: Compensatory Base Changes in ITS2 Secondary Structure Alignment, Modelling, and Molecular Phylogeny: An Integrated Approach to Improve Species Delimitation in Tulasnella (Basidiomycota)

    Journal: Journal of Fungi

    doi: 10.3390/jof9090894

    ITS2 sequence structure-based alignment generated by LocaRNA-P. Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.
    Figure Legend Snippet: ITS2 sequence structure-based alignment generated by LocaRNA-P. Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.

    Techniques Used: Sequencing, Generated



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    Image Search Results


    ITS2 sequence structure-based alignment generated by LocaRNA-P. Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.

    Journal: Journal of Fungi

    Article Title: Compensatory Base Changes in ITS2 Secondary Structure Alignment, Modelling, and Molecular Phylogeny: An Integrated Approach to Improve Species Delimitation in Tulasnella (Basidiomycota)

    doi: 10.3390/jof9090894

    Figure Lengend Snippet: ITS2 sequence structure-based alignment generated by LocaRNA-P. Dot-bracket notation represents unpaired bases and matching parenthesized positions represent paired bases. The red regions indicate structure reliability, the yellow regions represent sequence reliability, and the thin line shows the combined column-reliability.

    Article Snippet: Then, these structures were input into LocARNA v2.0 ( https://rna.informatik.uni-freiburg.de/LocARNA/Input.jsp;jsessionid=115161C5C9E9AB44CC6D3C81763A1699 , accessed on 2 February 2022) [ ] software to perform structural-alignment and consensus secondary structure modelling—see .

    Techniques: Sequencing, Generated